RegRNA
A Regulatory RNA Motifs and Elements Finder
  Release 1.0, Jan 2006
 
 
 

Accession R0839
Feature Type Exonic Splicing RegRNA
Class Exon silencer
Name Exon silencer
Pattern TTAG
BindingProtein hnRNPA1, SC35
References Mayeda A, Screaton GR, Chandler SD, Fu XD, and Krainer AR
Substrate specificities of SR proteins in constitutive splicing are determined by their RNA recognition motifs and composite pre-mRNA exonic elements.
Mol Cell Biol 1999; 19(3), 1853-63   PubMed 

Staffa A, and Cochrane A
Identification of positive and negative splicing regulatory elements within the terminal tat-rev exon of human immunodeficiency virus type 1.
Mol Cell Biol 1995; 15(8), 4597-605   PubMed 

Si ZH, Rauch D, and Stoltzfus CM
The exon splicing silencer in human immunodeficiency virus type 1 Tat exon 3 is bipartite and acts early in spliceosome assembly.
Mol Cell Biol 1998; 18(9), 5404-13   PubMed 


Department of Biological Science and Technology, Institute of Bioinformatics, National Chiao Tung University, Taiwan
Contact with Dr. Hsien-Da Huang