| Regulatory RNA Motifs in UTR 40 entries |
| Accession |
Name |
Taxon Range |
| R0001 |
Histone 3'UTR stem-loop structure (HSL3) |
UTR, 5' and 3' UTRs |
| R0002 |
Iron Responsive Element (IRE) |
UTR, 5' and 3' UTRs |
| R0003 |
Selenocysteine Insertion Sequence (SECIS) - type 1 |
3UTR, 3'UTRs |
| R0004 |
Selenocysteine Insertion Sequence (SECIS) - type 2 |
3UTR, 3'UTRs |
| R0005 |
Amyloid precursor protein mRNA stability control element (APP_SCE) |
UTR, 5' and 3' UTRs |
| R0006 |
Cytoplasmic polyadenylation element (CPE) |
3UTR, 3'UTRs |
| R0007 |
TGE translational regulation element (TGE) |
UTR, 5' and 3' UTRs |
| R0008 |
Nanos translation control element (NANOS_TCE) |
UTR, 5' and 3' UTRs |
| R0009 |
15-Lipoxygenase Differentiation Control Element (15-LOX-DICE) |
UTR, 5' and 3' UTRs |
| R0010 |
AU-rich class-2 Element (ARE2) |
3UTR, 3'UTRs |
| R0011 |
Terminal Oligopyrimidine Tract (TOP) |
5UTR, 5'UTRs |
| R0012 |
Glusose transporter type-1 3'UTR cis-acting element(GLUT1) |
UTR, 5' and 3' UTRs |
| R0013 |
Tumor necrosis factor alpha 3'UTR cis-acting element(TNF) |
UTR, 5' and 3' UTRs |
| R0014 |
Vimentin 3'UTR cis-acting element(VIM3) |
UTR, 5' and 3' UTRs |
| R0015 |
Internal Ribosome Entry Site (IRES) |
5UTR, 5'UTRs |
| R0016 |
Male specific lethal 5'UTR cis-acting element (MSL2-5UTR) |
5INV, 5'UTRs from invertebrate mRNAs |
| R0017 |
Male specific lethal 3'UTR cis-acting element (MSL2-3UTR) |
3INV, 3'UTRs from invertebrate mRNAs |
| R0018 |
Ribosomal S12 mitochondrial protein 5'UTR translation control element (RPMS12_TCE) |
UTR, 5' and 3' UTRs |
| R0019 |
Bruno 3'UTR responsive element (BRE) |
UTR, 5' and 3' UTRs |
| R0020 |
Alcohol dehydrogenase 3'UTR downregulation control element (ADH_DRE) |
3INV, 3'UTRs from invertebrate mRNAs |
| R0021 |
Barley yellow dwarf virus translation control element (BYDV_TE) |
3PLN, 3'UTRs from plant mRNAs 3VRL, 3'UTRs from viral mRNAs |
| R0022 |
Proneural Box (PB) |
3HUM, 3'UTRs from human mRNAs 3INV, 3'UTRs from invertebrate mRNAs 3MAM, 3'UTRs from mammalian (not human/not rodent) mRNAs 3MUS, 3'UTRs from mouse mRNAs 3ROD, 3'UTRs from rodent (not mouse) mRNAs 3VRT, 3'UTRs from vertebrate (not mammal) mRNAs |
| R0023 |
K-Box (KB) |
3HUM, 3'UTRs from human mRNAs 3INV, 3'UTRs from invertebrate mRNAs 3MAM, 3'UTRs from mammalian (not human/not rodent) mRNAs 3MUS, 3'UTRs from mouse mRNAs 3ROD, 3'UTRs from rodent (not mouse) mRNAs 3VRT, 3'UTRs from vertebrate (not mammal) mRNAs |
| R0024 |
Brd-Box (Brd) |
3HUM, 3'UTRs from human mRNAs 3INV, 3'UTRs from invertebrate mRNAs 3MAM, 3'UTRs from mammalian (not human/not rodent) mRNAs 3MUS, 3'UTRs from mouse mRNAs 3ROD, 3'UTRs from rodent (not mouse) mRNAs 3VRT, 3'UTRs from vertebrate (not mammal) mRNAs |
| R0025 |
GY-Box (GY) |
3HUM, 3'UTRs from human mRNAs 3INV, 3'UTRs from invertebrate mRNAs 3MAM, 3'UTRs from mammalian (not human/not rodent) mRNAs 3MUS, 3'UTRs from mouse mRNAs 3ROD, 3'UTRs from rodent (not mouse) mRNAs 3VRT, 3'UTRs from vertebrate (not mammal) mRNAs |
| R0026 |
Androgen receptor GU-rich element (AR_CURE) |
3HUM, 3'UTRs from human mRNAs 3INV, 3'UTRs from invertebrate mRNAs 3MAM, 3'UTRs from mammalian (not human/not rodent) mRNAs 3MUS, 3'UTRs from mouse mRNAs 3ROD, 3'UTRs from rodent (not mouse) mRNAs 3VRT, 3'UTRs from vertebrate (not mammal) mRNAs |
| R0027 |
Elastin G3A 3'UTR stability motif (G3A) |
3HUM, 3'UTRs from human mRNAs 3MAM, 3'UTRs from mammalian (not human/not rodent) mRNAs 3MUS, 3'UTRs from mouse mRNAs 3ROD, 3'UTRs from rodent (not mouse) mRNAs 3VRT, 3'UTRs from vertebrate (not mammal) mRNAs |
| R0028 |
Insulin 3'UTR stability element (INS_SCE) |
3HUM, 3'UTRs from human mRNAs 3MAM, 3'UTRs from mammalian (not human/not rodent) mRNAs 3MUS, 3'UTRs from mouse mRNAs 3ROD, 3'UTRs from rodent (not mouse) mRNAs 3VRT, 3'UTRs from vertebrate (not mammal) mRNAs |
| R0029 |
Beta-actin 3'UTR zipcode (ACTIN_ZIP3) |
3HUM, 3'UTRs from human mRNAs 3MAM, 3'UTRs from mammalian (not human/not rodent) mRNAs 3MUS, 3'UTRs from mouse mRNAs 3ROD, 3'UTRs from rodent (not mouse) mRNAs 3VRT, 3'UTRs from vertebrate (not mammal) mRNAs |
| R0030 |
Gap-43 Stabilization Element (GAP-43) |
3HUM, 3'UTRs from human mRNAs 3MAM, 3'UTRs from mammalian (not human/not rodent) mRNAs 3MUS, 3'UTRs from mouse mRNAs 3ROD, 3'UTRs from rodent (not mouse) mRNAs 3VRT, 3'UTRs from vertebrate (not mammal) mRNAs |
| R0031 |
CaMKII/Ng dendritic localization element (CNDLE) |
3HUM, 3'UTRs from human mRNAs 3MAM, 3'UTRs from mammalian (not human/not rodent) mRNAs 3MUS, 3'UTRs from mouse mRNAs 3ROD, 3'UTRs from rodent (not mouse) mRNAs 3VRT, 3'UTRs from vertebrate (not mammal) mRNAs |
| R0032 |
alpha-globin 3'UTR C-rich stability determinant (AG-CRSD) |
HUM, UTRs from human mRNAs MAM, UTRs from mammalian (not human/not rodent) mRNAs MUS, UTRs from mouse mRNAs ROD, UTRs from rodent (not mouse) mRNAs VRT, UTRs from vertebrate (not mammal) mRNAs |
| R0033 |
Upstream Open Reading Frame (uORF) |
5UTR, 5'UTRs |
| R0034 |
Gamma interferon activated inhibitor of Ceruloplasmin mRNA translation (GAIT element) |
HUM, UTRs from human mRNAs MAM, UTRs from mammalian (not human/not rodent) mRNAs MUS, UTRs from mouse mRNAs ROD, UTRs from rodent (not mouse) mRNAs VRT, UTRs from vertebrate (not mammal) mRNAs |
| R0035 |
Mos polyadenylation response element (Mos-PRE) |
HUM, UTRs from human mRNAs MAM, UTRs from mammalian (not human/not rodent) mRNAs MUS, UTRs from mouse mRNAs ROD, UTRs from rodent (not mouse) mRNAs VRT, UTRs from vertebrate (not mammal) mRNAs |
| R0036 |
Drosophila hairy mRNA localization element (HLE) |
INV, UTRs from invertebrate mRNAs |
| R0037 |
Myelin Basic Protein Localization Element (MBP-A2RE11) |
HUM, UTRs from human mRNAs MAM, UTRs from mammalian (not human/not rodent) mRNAs MUS, UTRs from mouse mRNAs ROD, UTRs from rodent (not mouse) mRNAs VRT, UTRs from vertebrate (not mammal) mRNAs |
| R0038 |
Protamine P1 3’UTR Y-Box recognition site (Protamine-YRS) |
HUM, UTRs from human mRNAs MAM, UTRs from mammalian (not human/not rodent) mRNAs MUS, UTRs from mouse mRNAs ROD, UTRs from rodent (not mouse) mRNAs VRT, UTRs from vertebrate (not mammal) mRNAs |
| R0039 |
Granulocyte colony-stimulating factor stem-loop destabilizing element (G-CSF_SLDE) |
HUM, UTRs from human mRNAs MAM, UTRs from mammalian (not human/not rodent) mRNAs MUS, UTRs from mouse mRNAs ROD, UTRs from rodent (not mouse) mRNAs VRT, UTRs from vertebrate (not mammal) mRNAs |
| R0040 |
Renin stability regulatory element (Ren_SRE) |
HUM, UTRs from human mRNAs MAM, UTRs from mammalian (not human/not rodent) mRNAs MUS, UTRs from mouse mRNAs ROD, UTRs from rodent (not mouse) mRNAs VRT, UTRs from vertebrate (not mammal) mRNAs |
Regulatory Motif Classes 